Kurt said:
I always remove the valve covers, put the trans into high gear, and get behind the bike and rotate the rear wheel. I watch for the left intake valve to open and then begin to close. I know then that the left side is approaching TDC on the compression stroke. I reposition myself by the timing hole on the left side and bump the rear wheel with my hand. I watch for the F, S, then finally OT.
There is no need to watch the for the F, S and then the OT mark. There is no point in even removing the inspection plug except when setting/checking the ignition timing.
There is nothing wrong with the way you are doing it, but If you want a short cut with the same results, simply rotate the engine with both valve covers off and observe when the exhaust valve is closing and the intake valve is opening and find the
approximate middle point of their travel in relation to each other by slightly rocking the crank forward and back and then adjust the other side.
You don't have to be 100% precise, you could theoretically be 90 (crankshaft) degrees off in either direction and it would make no difference.
if the exhaust is closing and the intake is opening on one side, the other side is safely well within the 180+ degree flat part of the cam. You can safely be 90 crankshaft degrees away from OT (180 camshaft degrees) and set valve clearances.
To sum it up, it makes no difference if you are on F, S, or OT, or way before or way past, when you adjust the valves, the result will be the same
providing the other side is anywhere within the overlap.
If you have a loose cam around, examine it and you'll see what I mean